gpu

Engagements

Improving alphafold performance and applications of alphafold
Zhiyong Zhang
Stanford University

The project involves the improvements of the alphafold program. The projects includes two parts, improvements of the program and possible applications of it in collaboration with different researchers. The effort will be in coordination of research groups interested in the application of alphafold. 

Specifically the performance improvements involves a hierarchical/diverse aspects of the code, (1)I/O, (2) databases query, (3) multithread/multi process in python, as well as GPU acceleration, and more.   

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Affinity Groups

Name Description Tags Join
Delta ACCESS Affinity Group logo DELTA DELTA is a dedicated, ACCESS-allocated resource designed by HPE and NCSA, delivering a highly capable GPU-focused compute environment for GPU and CPU workloads. Besides offering a mix of standard and… gpu
High Performance Visualization image High Performance Visualization This group first and foremost is a space for those experimenting and learning to leverage High Performance Compute environments for visualization. To be a part of this community you don't need to be… open-ondemand, gpu, vnc
Jetstream-2 ACCESS Affinity Group logo Jetstream-2 Jetstream2 is a transformative update to the NSF’s science and engineering cloud infrastructure and provides 8 petaFLOPS of supercomputing power to simplify data analysis, boost discovery, and… cloud-open-source, cloud-storage, openstack, ai, machine-learning, tensorflow, science gateway, gpu, nvidia, cuda, jupyterhub, matlab, vnc, containers, singularity

People with expertise

Jonathan Blanchard

Western New England University

Programs

Northeast

Roles

student-facilitator, mentee

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Expertise

Christopher Blanton, Ph.D.

North Carolina State University at Raleigh

Programs

Campus Champions

Roles

research computing facilitator, research software engineer

Expertise

Jack Boynton

University of Vermont

Programs

Northeast

Roles

student-facilitator, researcher/educator

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Expertise

People with interest

Keidy Alcantara

New Jersey Institute of Technology

Roles

student-facilitator

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Interests

Ritesh Bachhar

University of Rhode Island

Programs

CAREERS

Roles

student-facilitator

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Interests

Jonathan Blanchard

Western New England University

Programs

Northeast

Roles

student-facilitator, mentee

Placeholder headshot
Interests