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Title Category Tags Skill Level
Fine-tuning LLMs with PEFT and LoRA Video fasteroptimizationperformance-tuning +1 more tags Intermediate, Advanced

Engagements

Re-engineering Lilly’s KisunlaTM into a novel antibody targeting IL13RA2 against GBM using AI-driven macromolecular modeling
Atrium Health Levine Cancer
  • Summary and objectives of the proposed experiments: 
  1. An initial research-based Ab (scFv47, discovered by our collaborator Dr. Balyasnikova) model, modeling Ab-Ag (IL13RA2 against GBM) protein complex, and identifying the binding sites (epitopes) using ROSETTA and AlphaFold2 multimer tools.
  2. Graft the CDRs of scFv (single-chain variable fragment) of antibody or Bispecific T cell engagers (BTEs) onto the template Ab, the framework of Lilly's Kisunla™ Ab drug.
  3. Modify, improve, and optimize the overall or full antibody protein structures using AI-driven macromolecule modeling (AlphaFold3).
  4. Explore single nucleotide polymorphism (SNP), pathogenic genetic variants and N-glycosylation of IL13RA2 (target) protein domain interacting with the Ab candidates among the patient population using ROSETTA software packages.
Status: Recruiting

People with Expertise

Ron Rahaman

Georgia Institute of Technology

Programs

Campus Champions

Roles

research software engineer

Ronald Rahaman

Expertise

Ying-Chih Sun

Harrisburg University

Programs

CAREERS

Roles

student-facilitator

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Expertise

Seung Woo Son

University of Massachusetts Lowell

Programs

Northeast

Roles

mentor

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Expertise

People with Interest

Matthew Gilmore

University of North Dakota

Programs

ACCESS CSSN

Roles

cssn

Formal photo of Matthew Gilmore Fall 2021

Interests

Xiaoyi Lu

University of California, Merced

Programs

ACCESS CSSN

Roles

cssn

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Interests

Matthew Chung

University of California, Riverside

Programs

ACCESS CSSN, CCMNet

Roles

student-facilitator, cssn, CCMNet

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Interests