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Knowledge Base Resources

These resources are contributed by researchers, facilitators, engineers, and HPC admins. Please upvote resources you find useful!
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Topics

  • data-analysis (12)
  • big-data (5)
  • deep-learning (4)
  • documentation (4)
  • machine-learning (4)
  • ai (3)
  • r (3)
  • pytorch (2)
  • training (2)
  • visualization (2)
  • data-reproducibility (1)
  • hpc-operations (1)
  • java (1)
  • opencv (1)
  • plotting (1)
  • programming (1)
  • programming-best-practices (1)
  • tensorflow (1)
  • weka (1)
  • workflow (1)
  • workforce-development (1)

Topics

  • data-analysis (12)
  • big-data (5)
  • deep-learning (4)
  • documentation (4)
  • machine-learning (4)
  • ai (3)
  • r (3)
  • pytorch (2)
  • training (2)
  • visualization (2)
  • data-reproducibility (1)
  • hpc-operations (1)
  • java (1)
  • opencv (1)
  • plotting (1)
  • programming (1)
  • programming-best-practices (1)
  • tensorflow (1)
  • weka (1)
  • workflow (1)
  • workforce-development (1)

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Introduction to Python for Digital Humanities and Computational Research
1
  • Introduction to Python book
This documentation contains introductory material on Python Programming for Digital Humanities and Computational Research. This can be a go-to material for a beginner trying to learn Python programming and for anyone wanting a Python refresher.
aibig-datadata-analysisdeep-learningdata-sciencepython
1 Like

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Type
documentation
Level
Beginner
Useful R Packages for Data Science and Statistics
1
  • https://www.udacity.com/blog/2021/01/best-r-packages-for-data-science.html
This Udacity article listed the most frequently used R packages for data science and statistics. For each package, the article provided the link to its official documentation. It will be a great start point if you want to start your data science journey in R.
plottingvisualizationdata-analysismachine-learningdata-sciencer
1 Like

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Type
documentation
Level
Beginner, Intermediate, Advanced
R for Data Science
0
  • https://r4ds.had.co.nz/index.html
R for Data Science is a comprehensive resource for individuals looking to harness the power of the R programming language for data analysis, visualization, and statistical modeling. Whether you're a beginner or an experienced data scientist, this guide will help you unlock the full potential of R in the realm of data science.
visualizationdata-analysisdata-sciencer
0 Likes

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Type
learning
Level
Beginner, Intermediate, Advanced
HPCwire
0
  • HPCwire
HPCwire is a prominent news and information source for the HPC community. Their website offers articles, analysis, and reports on HPC technologies, applications, and industry trends.
documentationpytorchdata-sciencebioinformaticshpc-operationstrainingprogrammingprogramming-best-practicespython
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Type
website
Level
Beginner, Intermediate, Advanced
Python Data and Viz Training (CCEP Program)
0
5 Days of recordings of Python data analysis and visualization training.
data-sciencepython
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Type
learning
Level
Beginner, Intermediate
Samtools Documentation
0
  • https://www.htslib.org/doc/
Samtools is a suite of programs for interacting with high-throughput sequencing data, especially in the SAM/BAM format. It offers various utilities for processing, analyzing, and managing sequence data generated from next-generation sequencing (NGS) experiments. Samtools is widely used in bioinformatics and genomics research for tasks such as read alignment, variant calling, and data manipulation.
documentationdata-analysisbioinformaticsdata-sciencegenomics
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Type
documentation
Level
Beginner, Intermediate, Advanced
Weka
0
  • Weka Homepage
  • Weka Data Mining Tutorials
Weka is a collection of machine learning algorithms for data mining tasks. It contains tools for data preparation, classification, regression, clustering, association rules mining, and visualization.
big-datadata-analysismachine-learningwekadata-sciencejava
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Type
tool
Level
Intermediate, Advanced
Optimizing Research Workflows - A Documentation of Snakemake
0
  • https://snakemake.readthedocs.io/en/stable/
Snakemake is a powerful and versatile workflow management system that simplifies the creation, execution, and management of data analysis pipelines. It uses a user-friendly, Python-based language to define workflows, making it particularly valuable for automating and reproducibly managing complex computational tasks in research and data analysis.
documentationdata-analysisdata-reproducibilityworkflowbioinformaticsdata-sciencepython
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Type
documentation
Level
Intermediate, Advanced
Data Analysis with R for Educators
0
  • Data Analysis with R for Educators
This webinar series is an orientation to R. We start with an overview of R’s history and place in the larger data science ecosystem. Next, we introduce the R Studio user interface and how to access R’s excellent documentation. Finally, we present the fundamental concepts you need to use the R environment and language for data analysis. Along the way, we compare R script files (.R) to R Notebook (.Rmd) files and show how the features of R Notebook support better communication and encourage more dynamic engagement with statistical analysis and code. It is helpful to be familiar with tabular data analysis using statistical software, database tools, or spreadsheet programs. Workshop materials, including setup directions and slides are available at https://github.com/CornellCAC/r_for_edu/ The Rstudio Cloud project used in the workshop is https://rstudio.cloud/project/4044219.
data-analysisdata-sciencepsychologybiologytrainingworkforce-developmentr
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Type
video_link
Level
Beginner
Numpy - a Python Library
0
  • NumPY Docs
Numpy is a python package that leverages types and compiled C code to make many math operations in Python efficient. It is especially useful for matrix manipulation and operations.
documentationbig-datadata-analysisdeep-learningopencvpytorchtensorflowdata-science
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Type
tool
Level
Beginner, Intermediate
Online Master's in Business Analytics Program Guide - TechGuide
0
  • Find Online Master's in Business Analytics
A degree in business analytics looks different in today’s world than it did a decade ago. In its most current application, business analytics uses modern data science and capabilities in machine learning (ML). The magic comes into play when these are leveraged for strategic planning.
machine-learningbig-datadata-analysisdata-science
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Type
website
Level
Advanced
Fairness and Machine Learning
0
  • Fairness and Machine Learning
The "Fairness and Machine Learning" book offers a rigorous exploration of fairness in ML and is suitable for researchers, practitioners, and anyone interested in understanding the complexities and implications of fairness in machine learning.
aidata-analysisdeep-learningmachine-learningdata-science
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Type
documentation
Level
Intermediate, Advanced
Master's in Data Science Program Guide - TechGuide
0
  • Masters in Data Science Program Guide
A master’s degree in data science helps prepare professionals to take the next career step. This article will focus primarily on data science, a graduate degree in this field, and a data scientist or data analyst career. With many employers preferring a master’s degree in data science for those seeking to fill roles as data scientists or analysts, we will discuss the data science master’s degree in detail.
big-datadata-analysisdata-science
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Type
website
Level
Advanced