The Carpentries
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We teach foundational coding and data science skills to researchers worldwide.
DARWIN Documentation Pages
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DARWIN (Delaware Advanced Research Workforce and Innovation Network) is a big data and high performance computing system designed to catalyze Delaware research and education
Open OnDemand
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Open OnDemand is an easy-to-use web portal that lets students, researchers, and industry professionals use supercomputers from anywhere. It is installed on supercomputing resources at hundreds of sites. By eliminating the need for client software or command-line interface, Open OnDemand empowers users of all skill levels and significantly speeds up the time to their first computing.
Useful R Packages for Data Science and Statistics
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This Udacity article listed the most frequently used R packages for data science and statistics. For each package, the article provided the link to its official documentation. It will be a great start point if you want to start your data science journey in R.
HPC Carpentry
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An HPC focused Carpentry community. Trainings include: HPC fundamentals, python, chapel, LAMMPS, parallelization with python, scaling studies, etc.
ACCESS Pegasus Documentation
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The documentation provides an overview of using Pegasus, a workflow management system, on ACCESS resources for high throughput computing (HTC) workloads, covering logging in, workflow creation, resource configuration, and monitoring options.
Campus Champions Home Page
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Campus Champions foster a dynamic environment for a diverse community of research computing and data professionals sharing knowledge and experience in digital research infrastructure.
Neurodesk
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Neurodesk provides a containerised data analysis environment to facilitate reproducible analysis of neuroimaging data. Analysis pipelines for neuroimaging data typically rely on specific versions of packages and software, and are dependent on their native operating system. These dependencies mean that a working analysis pipeline may fail or produce different results on a new computer, or even on the same computer after a software update. Neurodesk provides a platform in which anyone, anywhere, using any computer can reproduce your original research findings given the original data and analysis code.
Ask.CI Q&A Platform for Research Computing
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Chameleon
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Chameleon is an NSF-funded testbed system for Computer Science experimentation. It is designed to be deeply reconfigurable, with a wide variety of capabilities for researching systems, networking, distributed and cluster computing and security.
CaRCC Data Facing Track
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The Data-Facing Track of the People Network brings together people from research computing groups, libraries, research institutes, and other organizations who support data-enabled research. Many of us are also Researcher-Facing, but this track is an opportunity to discuss the varied challenges of working with data.
Official Documentation of VisIt
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VisIt is a prominent open-source, interactive parallel visualization and graphical analysis tool predominantly used for viewing scientific data. Its GitHub repository offers a detailed insight into the software's source code, documentation, and contribution guidelines. In particular, it offers useful examples on how it
Expanse Home Page
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Expanse at SDSC is a cluster designed by Dell and SDSC delivering 5.16 peak petaflops, and offers Composable Systems and Cloud Bursting.
Probabilistic Semantic Data Association for Collaborative Human-Robot Sensing
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Humans cannot always be treated as oracles for collaborative sensing. Robots thus need to maintain beliefs over unknown world states when receiving semantic data from humans, as well as account for possible discrepancies between human-provided data and these beliefs. To this end, this paper introduces the problem of semantic data association (SDA) in relation to conventional data association problems for sensor fusion. It then, develops a novel probabilistic semantic data association (PSDA) algorithm to rigorously address SDA in general settings. Simulations of a multi-object search task show that PSDA enables robust collaborative state estimation under a wide range of conditions.
CUDA Toolkit Documentation
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NVIDIA CUDA Toolkit Documentation: If you are working with GPUs in HPC, the NVIDIA CUDA Toolkit is essential. You can access the CUDA Toolkit documentation, including programming guides and API references, at this provided website
Jetstream2 Status
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Jetstream2 makes cutting-edge high-performance computing and software easy to use for your research regardless of your project’s scale—even if you have limited experience with supercomputing systems.Cloud-based and on-demand, the 24/7 system includes discipline-specific apps. You can even create virtual machines that look and feel like your lab workstation or home machine, with thousands of times the computing power.
Developer Stories Podcast
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As developers, we get excited to think about challenging problems. When you ask us what we are working on, our eyes light up like children in a candy store. So why is it that so many of our developer and software origin stories are not told? How did we get to where we are today, and what did we learn along the way? This podcast aims to look “Behind the Scenes of Tech’s Passion Projects and People.” We want to know your developer story, what you have built, and why. We are an inclusive community - whatever kind of institution or country you hail from, if you are passionate about software and technology you are welcome!
RRCoP Resources Page
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Very helpful list of Regulated Research Community of Practice's collaborating communities.
ACCESS Guide (originally given at Duke OIT)
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A guide for Duke OIT on how to advise users on using ACCESS and allocation credits to jetstream 2 for Duke University members. This can be used for non Duke members. Assumes the reader has basic knowledge of ACCESS.
Anvil Home Page
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Neurostars
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A question and answer forum for neuroscience researchers, infrastructure providers and software developers.
Globus Documentation
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Globus is a data transfer, sharing, automation, and discovery service used by hundreds of thousands of researchers to manage "big data" at universities, research labs, and national systems such as ACCESS. The Globus documentation website provides how-to guides, reference documentation, and examples for Globus's web application, command-line interface, Python software development kit (SDK), and APIs.
Open Storage Network
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The Open Storage Network, a national resource available through the XSEDE resource allocation system, is high quality, sustainable, distributed storage cloud for the research community.
Time-Series LSTMs Python Walkthrough
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A walkthrough (with a Google Colab link) on how to implement your own LSTM to observe time-dependent behavior.
Better Scientific Software (BSSw)
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The Better Scientific Software (BSSw) project provides a community to collaborate and learn about best practices in scientific software development. Software—the foundation of discovery in computational science & engineering—faces increasing complexity in computational models and computer architectures. BSSw provides a central hub for the community to address pressing challenges in software productivity, quality, and sustainability.